Publications
2025
Bodin, Stéphane; Elhabashy, Hadeer; Macdonald, Ewan; Winter, Dominic; Gauthier-Rouvière, Cécile
Flotillins in membrane trafficking and physiopathology
in Biology of the Cell volume 117 (2025) issue 1
doi:10.1111/boc.202400134 ...
2024
Röhl, Alexander; Netz, Eugen; Kohlbacher, Oliver; Elhabashy, Hadeer
CLAUDIO: automated structural analysis of cross-linking data
in Bioinformatics volume 40 (2024) issue 4
doi:10.1093/bioinformatics/btae146 ...
2023
Podobnik, Marco; Singh, Ajeet P.; Fu, Zhenqiang; Dooley, Christopher M.; Frohnhöfer, Hans Georg; Firlej, Magdalena; Stednitz, Sarah J.; Elhabashy, Hadeer; Weyand, Simone; Weir, John R.; Lu, Jianguo; Nüsslein-Volhard, Christiane; Irion, Uwe
kcnj13 regulates pigment cell shapes in zebrafish and has diverged by cis-regulatory evolution ...
in Development volume 150 (2023) issue 16
doi:10.1242/dev.201627 ...
2023
Elhabashy, Hadeer
Method Development for Large-Scale Prediction and Modeling of Protein-Protein Interactions
Tübingen, 2023
doi:10.15496/publikation-90017 ...
(dissertation, 2023,
)
Elhabashy, Hadeer; Netz, Eugen; Kohlbacher, Oliver
XLEC: Large-scale prediction and modeling of protein-protein interaction using sequence co-evol ...
2023
11th Symposium on Structural Proteomics (SSP 2023), Utrecht, The Netherlands
2022
Singh, Jasjot; Elhabashy, Hadeer; Muthukottiappan, Pathma; Stepath, Markus; Eisenacher, Martin; Kohlbacher, Oliver; Gieselmann, Volkmar; Winter, Dominic
Cross-linking of the endolysosomal system reveals potential flotillin structures and cargo
in Nature Communications volume 13 (2022)
doi:10.1038/s41467-022-33951-0 ...
Elhabashy, Hadeer; Merino, Felipe; Alva, Vikram; Kohlbacher, Oliver; Lupas, Andrei N.
Exploring protein-protein interactions at the proteome level
in Structure volume 30 (2022) issue 4. - page 462-475
doi:10.1016/j.str.2022.02.004 ...
2021
Green, Anna G.; Elhabashy, Hadeer; Brock, Kelly P.; Maddamsetti, Rohan; Kohlbacher, Oliver; Marks, Debora S.
Large-scale discovery of protein interactions at residue resolution using co-evolution calculat ...
in Nature Communications volume 12 (2021)
doi:10.1038/s41467-021-21636-z ...
2020
Biggers, Laurence; Elhabashy, Hadeer; Ackad, Edward; Yousef, Mohammad S.
Molecular dynamics simulations of an engineered T4 lysozyme exclude helix to sheet transition, ...
in Protein Science volume 29 (2020) issue 2. - page 542-554
doi:10.1002/pro.3780 ...
2013
Kholmurodov, Kholmirzo T.; Dushanov, Ermuhammad B.; Krasavin, Evgenii A.; Hassan, Hagar K.; Elhabashy, Hadeer; Galal, Ahmed; Sweilam, Nasser H.; Yasuoka, Kenji
Molecular dynamics simulations of the DNA interaction with metallic nanoparticles and TiO₂ surf ...
Models in Bioscience and Materials Research : Molecular Dynamics and Related Techniques
New York : Nova Science Publishers, 2013. - page 167-200